Class Summary |
Deletion |
The class for deletion variant. |
Exon |
The class Exon inherits abstract class Feature . |
ExtendedSequenceBuffer |
The class extending SequenceBuffer for handling structure
variants in the sequence. |
Feature |
The abstract class for all annotation features. |
Gene |
The class Gene inherits abstract class Feature and
contains information of gene. |
Insertion |
The class for insertion variant. |
Read |
The class for read information, including sequence string and the offset |
SequenceBuffer |
The class for sequence information, including sequence string and the offset |
Transcript |
The class Transcript inherits abstract class
Feature and contains information of transcript. |