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java.lang.Objectedu.unc.csbio.util.GTFParser
public class GTFParser
A GTF Parser conforms to GTF2.2 (http://mblab.wustl.edu/GTF22.html)
Field Summary | |
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private static java.lang.String |
assignmentDelimiter
three delimiters |
private static java.lang.String |
attributeDelimiter
three delimiters |
private static java.lang.String |
basicDelimiter
three delimiters |
private static java.lang.String[] |
basicKeyArray
right basic fields as a String array |
private static java.lang.String |
quoteSign
a quote sign |
Constructor Summary | |
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GTFParser()
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Method Summary | |
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static java.util.HashMap<java.lang.String,java.lang.String> |
parse(java.lang.String line)
This method returns a HashMap that contain the fields. |
private static java.lang.String |
stripLine(java.lang.String line)
A method to remove the leading and trailing whitespaces. |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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private static final java.lang.String[] basicKeyArray
private static final java.lang.String basicDelimiter
private static final java.lang.String attributeDelimiter
private static final java.lang.String assignmentDelimiter
private static final java.lang.String quoteSign
Constructor Detail |
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public GTFParser()
Method Detail |
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private static java.lang.String stripLine(java.lang.String line)
line
- orignal line
public static java.util.HashMap<java.lang.String,java.lang.String> parse(java.lang.String line)
line
- original line
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