Package edu.unc.csbio.util

Class Summary
BigFaReader this class is for reading data from a fasta file, and reading/generating an index file
FaReader this class is for reading data from a fasta file with provided starting and end position
FqWriter The class to output a fq file
GTFParser A GTF Parser conforms to GTF2.2 (http://mblab.wustl.edu/GTF22.html)
VCFReader A VCFReader Parser conforms to VCF 4.0 (http://www.1000genomes.org/node/101)