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java.lang.Objectedu.unc.csbio.data.Read
public class Read
The class for read information, including sequence string and the offset
Field Summary | |
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int |
length
The length of the read |
int |
offset
The offset of a read in a segment sequence coordinate |
char[] |
sequence
The read represented as a char string |
Constructor Summary | |
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Read(int _off,
java.lang.String _seq)
A constructor for Read object |
Method Summary | |
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java.lang.String |
toString()
A method to get read sequence |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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public final int offset
public final int length
public final char[] sequence
Constructor Detail |
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public Read(int _off, java.lang.String _seq)
Read
object
_off
- the offset of a read in a segment sequence coordinate_seq
- the read sequenceMethod Detail |
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public java.lang.String toString()
toString
in class java.lang.Object
Object.toString()
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